Knowledge Bases/Databases/Tools

Abstracts by Bio Application > Cross-Omics > Knowledge Bases/Databases/Tools

Each product name listed below links to a product abstract.

BiGG

BioCyc

BioCyc Open Chemical Database

BioGPS

BioGraph

Biologic Interactions and Network Analysis (BIANA)

BioMAJ

BioModels Database

Bioverse

BioWarehouse

Cancer Molecular Analysis Project (CMAP)

Catalogue of Somatic Mutations in Cancer (COSMIC)

CellCircuits

CellMiner

Comparative Toxicogenomics Database (CTD)

ConsensusPathDB

CoryneRegNet

DASMIweb

DAVID 2.0

DataBase of CpG islands and Analytical Tool (DBCAT)

deepBase

DIANA Lab microRNA Databases and Tools

Distributed Annotation System (DAS)

DNA Methylation Database (MethDB)

EcoCyc

eggNOG

Functional Disease Ontology (FunDO)

Functional Similarity Matrix (FunSimMat)

Gaggle

GeneMANIA

Generic Model Organism Database (GMOD)

Genes2Networks

Genetic Association Database (GAD)

Genomic Metadata for Infectious Agents (GeMInA)

geWorkbench

GoMiner

HuGE Navigator

Human Cancer Pathway Protein Interaction Network (HCPIN)

HumanCyc

ImmunoDeficiency Resource (IDR)

Immunome Knowledge Base (IKB)

Ingenuity Knowledge Base

Innate Immune Database (IIDB)

Interologous Interaction Database (I2D)

Kinase Enrichment Analysis (KEA)

KOBIC Diseasome

MatrixDB

MethyCancer

Michigan Molecular Interactions (MiMI)

microRNA.org website

miR2Disease

miRBase

miRo

miRSel

MirZ web server

modMine

MouseCyc

NGSmethDB

PhenoHM

PhenomiR

PHIDIAS

PIPs database

Prion Disease Database (PDDB)

Protein Lounge ePath3D

Protein Lounge Peptide-Antigen Database

Protein Lounge siRNA Database

PubMeth

RegulonDB

SABIO-RK

SchizophreniaGene (SZGene) database

STRING

Struct2Net

Swami, The Next Generation Biology Workbench

The Chromatin Database (ChromDB)

TranscriptomeBrowser and InteractomeBrowser

Vaccine Investigation and Online Information Network (VIOLIN)

WebGestalt